RoadMap

  SOAPaligner :A new alignment tool from SOAP v1.
  SOAPals (now named as SOAPsplice) :An ab initio detector of splice junctions with RNA-Seq data.
  SOAPsnp :A re-sequencing consensus sequence builder.
  SOAPdenovo :A de novo short reads assembler.
  SOAPindel :An indel finder.
  SOAPsv :A structural variation scanner.

What's new

  • 2013-01-28   SOAPdenovo v2.04 is released.
  • 2013-01-28   correction.tar.gz (now named as SOAPec) v2.01 for SOAPdenovo is released.
  • 2013-01-28   GapCloser v1.12 for SOAPdenovo is released.
  • 2010-05-12   SOAPdenovo v1.04 on MAC OS(32bit/64bit) and Linux 32bit are released.
  • 2010-05-05   SOAPals (now named as SOAPsplice) v1.1 is released.
  • 2010-05-05   SOAPaligner v2.20 with source code (GNU GPL v3) is released.
  • 2010-04-18   SOAPals (now named as SOAPsplice) v1.0 is released.
  • 2010-04-16   A format conventor named soap2sam.pl is released.
  • 2010-01-25   GapCloser for SOAPdenovo is released.
  • 2009-12-21   SOAPdenove v1.04 is released.
  • 2009-08-13   SOAPaligner v2.20 is released.
  • 2009-07-13   SOAPaligner v2.19 is released.
  • 2009-07-03   correction.tar.gz for SOAPdenove is released.
  • 2009-06-09   SOAPdenove v1.03 is released.
  • 2009-06-02   SOAPdenove v1.02 is released.
  • 2009-05-25   SOAPaligner v2.18 is released.
  • 2009-05-25   SOAPsnp v1.03 is released.
  • 2009-05-25   SOAPdenove v1.01 is released.
  • 2009-05-11   SOAPdenovo v1.0 is released.
  • 2009-04-10   SOAPsnp v1.02 is released.
  • 2009-04-03   SOAPaligner v2.17 is released.
  • 2009-03-31   SOAPaligner v2.16 is released.
  • 2009-03-30   SOAPsnp v1.01 is released.
  • 2009-03-27   SOAPaligner v2.15 is released.
  • 2009-03-17   SOAPaligner v2.11 is released.
  • 2009-03-03   SOAPaligner v2.10 is released.
  • 2008-12-10   Added the test data .
  • 2008-12-08   A sort tool named "msort" is offered.
  • 2008-11-24   SOAPaligner v2.01 is released formally.
  • 2008-11-17   SOAPaligner v2.01-beta is released.
  • 2008-11-13   New SOAP is released with SOAPaligner and SOAPsnp.
  • 2008-11-13   SOAP's website is updated to this new version.

Resource

1. Test Data for SOAP 2


2. Msort: a better sort tool; sort text file rows by multiple fields; writen by Ruan Jue from BGI .


3. SOAPec_v2.01.tar.gz for SOAPdenovo NEW


4. GapCloser-bin-v1.12-r6.tgz for SOAPdenovoNEW


5. prepare.tgz for SOAPdenovo NEW

6. Another correction tool for SOAPdenovo NEW


Contact Us

soap@genomics.org.cn

Links



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